miRBase entry: tch-mir-450a-1

Stem-loop tch-mir-450a-1


Accession
MI0031134
Description
Tupaia chinensis tch-mir-450a-1 precursor miRNA
Gene family
MIPF0000128; mir-450


Sequence

UUUUGCGAUGUGUUCCUAAUAUgcauuuagaaauauauugggaacauuuugcaugcau
...(((((.((((((((((((((..........)))))))))))))).))))).....

Structure
--UUU     U              cauu 
     UGCGA GUGUUCCUAAUAUg    u
     ||||| ||||||||||||||     
     acguu uacaaggguuauau    a
uacgu     u              aaag 


Annotation confidence Not enough data
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Genome context
KB370352.1: 2042126-2042183 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from tch-mir-450a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-450a-5p

Accession MIMAT0036475
Description Tupaia chinensis tch-miR-450a-5p mature miRNA
Sequence 1 - UUUUGCGAUGUGUUCCUAAUAU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254