Stem-loop tch-mir-188

Accession

MI0031149

Description

Tupaia chinensis tch-mir-188 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

CAUCCCUUGCAUGGUGGAGGGUgagcuuucugaaaacccCUCCCACAUGCAAGGUUUGCA
((..(((((((((..((((((....(.....).....))))))..)))))))))..))..

Structure

--  UC         GU      -Ugag u 
  CA  CCUUGCAUG  GGAGGG     c u
  ||  |||||||||  ||||||     | u
  GU  GGAACGUAC  CCUCcc     g c
AC  UU         AC      caaaa u 

Annotation confidence Not enough data

Genome context

KB362223.1: 302221-302280 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-188

Mature tch-miR-188-5p

• Accession: MIMAT0036491
• Description: Tupaia chinensis tch-miR-188-5p mature miRNA
• Sequence: 1 - CAUCCCUUGCAUGGUGGAGGGU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-188-3p

• Accession: MIMAT0036492
• Description: Tupaia chinensis tch-miR-188-3p mature miRNA
• Sequence: 40 - CUCCCACAUGCAAGGUUUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254