miRBase entry: tch-mir-29b-1

Stem-loop tch-mir-29b-1

Accession

MI0031151

Description

Tupaia chinensis tch-mir-29b-1 precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

cugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUU
(((((((((.((((((.((.((((..............)))))))))))).)))))))))....

Structure

----         c      g  u    uuuucc 
    cugguuuca auggug cu agau      a
    ||||||||| |||||| || ||||       
    GACUAAAGU UACCAC GA Ucua      u
UUGU         U      -  -    uguuuc

Annotation confidence Not enough data

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Genome context

KB321094.1: 6017770-6017833 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-29b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-29b-3p

Accession	MIMAT0036494
Description	Tupaia chinensis tch-miR-29b-3p mature miRNA
Sequence	42 - UAGCACCAUUUGAAAUCAGUGUU - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254