Stem-loop tch-mir-409

Accession

MI0031159

Description

Tupaia chinensis tch-mir-409 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

agguuacccgagcaacuuugcaucuggacgacGAAUGUUGCUCGGUGAACCCCU
.((((..((((((((((((((........).)))).)))))))))..))))...

Structure

--a    ac         -    - auc 
   gguu  ccgagcaac uuug c   u
   ||||  ||||||||| |||| |    
   CCAA  GGCUCGUUG AAGc g   g
UCC    GU         U    a cag 

Annotation confidence Not enough data

Genome context

KB321140.1: 4927019-4927072 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-409

Mature tch-miR-409-3p

• Accession: MIMAT0036502
• Description: Tupaia chinensis tch-miR-409-3p mature miRNA
• Sequence: 33 - GAAUGUUGCUCGGUGAACCCCU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254