miRBase entry: tch-mir-17

Stem-loop tch-mir-17


Accession
MI0031174
Description
Tupaia chinensis tch-mir-17 precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

CAAAGUGCUUACAGUGCAGGUAGugauaugugcaucuacugcagugaaggcacuuguagc
..((((((((.((.(((((.(((((.......)).)))))))).)).)))))))).....

Structure
---CA        A  G     G   -  au 
     AAGUGCUU CA UGCAG UAG ug  a
     |||||||| || ||||| ||| ||  u
     uucacgga gu acguc auc ac  g
cgaug        a  g     -   u  gu 


Annotation confidence Not enough data
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Genome context
KB320410.1: 3473178-3473237 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from tch-mir-17
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-17-5p

Accession MIMAT0036516
Description Tupaia chinensis tch-miR-17-5p mature miRNA
Sequence 1 - CAAAGUGCUUACAGUGCAGGUAG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254