miRBase entry: tch-mir-222

Stem-loop tch-mir-222


Accession
MI0031267
Description
Tupaia chinensis tch-mir-222 precursor miRNA
Gene family
MIPF0000051; mir-221


Sequence

cucaguagccaguguagauccugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGU
(((((((((((((((((...(((...........)))...))))).)))))))))))).

Structure
-            -     auc   ucuu 
 cucaguagccag uguag   cug    u
 |||||||||||| |||||   |||    u
 GGGUCAUCGGUC ACAUC   gac    g
U            U     GAc   uaau 


Annotation confidence Not enough data
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Genome context
KB362665.1: 270255-270313 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-222
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-222-3p

Accession MIMAT0036600
Description Tupaia chinensis tch-miR-222-3p mature miRNA
Sequence 39 - AGCUACAUCUGGCUACUGGGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254