miRBase entry: tch-mir-200b

Stem-loop tch-mir-200b


Accession
MI0031282
Description
Tupaia chinensis tch-mir-200b precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

caucuuacugggcagcauuggauggugucuggucucUAAUACUGCCUGGUAAUGAUGA
(((((((((((((((.((((((.((.......)))))))).))))))))))).)))).

Structure
-    -           c      u  ug 
 cauc uuacugggcag auugga gg  u
 |||| ||||||||||| |||||| ||  c
 GUAG AAUGGUCCGUC UAAUcu cu  u
A    U           A      -  gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB364377.1: 9043059-9043116 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-200b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-200b-3p

Accession MIMAT0036612
Description Tupaia chinensis tch-miR-200b-3p mature miRNA
Sequence 37 - UAAUACUGCCUGGUAAUGAUGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254