miRBase entry: oha-let-7a-3

Stem-loop oha-let-7a-3


Accession
MI0031308
Description
Ophiophagus hannah oha-let-7a-3 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

uggaggUGAGGUAGUAGGUUGUAUAGUUugugggagggauuaaaucccauuucaggugauAACUAUACAGUCUAUUGCCUuccuuaa
..((((.((((((((((((((((((((((.((((((((((...))))).))))).)....)))))))))))))))))))))))))..

Structure
ug    U                     ---- g     -     u 
  gagg GAGGUAGUAGGUUGUAUAGUU    u uggga gggau  
  |||| |||||||||||||||||||||    | ||||| ||||| a
  uucc uUCCGUUAUCUGACAUAUCAA    g acuuu cccua  
aa    -                     uagu g     a     a 


Annotation confidence Not enough data
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Genome context
AZIM01002240.1: 87699-87785 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-let-7a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-let-7a-5p

Accession MIMAT0036626
Description Ophiophagus hannah oha-let-7a-5p mature miRNA
Sequence 7 - UGAGGUAGUAGGUUGUAUAGUU - 28
Evidence not_experimental

Mature oha-let-7a-3-3p

Accession MIMAT0036639
Description Ophiophagus hannah oha-let-7a-3-3p mature miRNA
Sequence 61 - AACUAUACAGUCUAUUGCCU - 80
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656