miRBase entry: oha-mir-101b

Stem-loop oha-mir-101b


Accession
MI0031315
Description
Ophiophagus hannah oha-mir-101b precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

acugugaacuguccuuuuUCGGUUAUCAUGGUACCGGUGCuguauguaugaaaggUACAGUACUGUGAUAACUGAAGaaugauagugccaucacaau
..(((((((((((.((((((((((((((((((((..(((((............))))).)))))))))))))))))))).))))))....)))))..

Structure
ac     ----      c                    CG     guaug 
  uguga    acuguc uuuuUCGGUUAUCAUGGUAC  GUGCu     u
  |||||    |||||| ||||||||||||||||||||  |||||      
  acacu    ugauag aaGAAGUCAAUAGUGUCAUG  CAUgg     a
ua     accg      u                    -A     aaagu 


Annotation confidence Not enough data
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Genome context
AZIM01000420.1: 86263-86359 [-]

Database links

Mature oha-miR-101b-5p

Accession MIMAT0036652
Description Ophiophagus hannah oha-miR-101b-5p mature miRNA
Sequence 19 - UCGGUUAUCAUGGUACCGGUGC - 40
Evidence not_experimental

Mature oha-miR-101b-3p

Accession MIMAT0036653
Description Ophiophagus hannah oha-miR-101b-3p mature miRNA
Sequence 56 - UACAGUACUGUGAUAACUGAAG - 77
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656