miRBase entry: oha-mir-10c

Stem-loop oha-mir-10c


Accession
MI0031321
Description
Ophiophagus hannah oha-mir-10c precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

gucuauauaUACCCUGUAGAACCGAAUUUGUGUGguguuuacguagucaCAGAUUCGAUUCUAGGGGAAUAuauggu
..((((((((.((((.(((((.((((((((((...............)))))))))).))))))))).)))))))).

Structure
gu        A    G     C          UGgugu 
  cuauauaU CCCU UAGAA CGAAUUUGUG      u
  |||||||| |||| ||||| ||||||||||      u
  gguauAUA GGGG AUCUU GCUUAGACac      a
-u        A    -     A          ugaugc 


Annotation confidence Not enough data
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Genome context
AZIM01000055.1: 585895-585971 [+]

Database links

Mature oha-miR-10c-5p

Accession MIMAT0036664
Description Ophiophagus hannah oha-miR-10c-5p mature miRNA
Sequence 10 - UACCCUGUAGAACCGAAUUUGUGUG - 34
Evidence not_experimental

Mature oha-miR-10c-3p

Accession MIMAT0036665
Description Ophiophagus hannah oha-miR-10c-3p mature miRNA
Sequence 50 - CAGAUUCGAUUCUAGGGGAAUA - 71
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656