miRBase entry: oha-mir-1329

Stem-loop oha-mir-1329


Accession
MI0031340
Description
Ophiophagus hannah oha-mir-1329 precursor miRNA
Gene family
MIPF0000635; mir-1329


Sequence

ccacaucugguuguaggggUACAGUGAUCAGGUUACGAAGGAuuucucuaguaacaaCCCCGUAGCUUGAUCACCAUCUcccuaugacucagauu
....(((((((((((((((....((((((((((((((..((................)).))))))))))))))....)))))))))).))))).

Structure
ccac     -          UACA              AA  Auuucuc 
    aucug guuguagggg    GUGAUCAGGUUACG  GG       u
    ||||| ||||||||||    ||||||||||||||  ||        
    uagac caguaucccU    CACUAGUUCGAUGC  CC       a
---u     u          CUAC              -C  aacaaug 


Annotation confidence Not enough data
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Genome context
AZIM01001276.1: 130192-130286 [-]

Database links

Mature oha-miR-1329-5p

Accession MIMAT0036696
Description Ophiophagus hannah oha-miR-1329-5p mature miRNA
Sequence 20 - UACAGUGAUCAGGUUACGAAGGA - 42
Evidence not_experimental

Mature oha-miR-1329-3p

Accession MIMAT0036697
Description Ophiophagus hannah oha-miR-1329-3p mature miRNA
Sequence 58 - CCCCGUAGCUUGAUCACCAUCU - 79
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656