miRBase entry: oha-mir-135-1

Stem-loop oha-mir-135-1


Accession
MI0031345
Description
Ophiophagus hannah oha-mir-135-1 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

aucccauugucuucUAUGGCUUUUUAUUCCUAUGUGAuuauauugcuaauuucaUAUAGGGAUUGAAGCCAUGCAAuacau
.......(((.((.(((((((((..((((((((((((..............)))))))))))).))))))))).)).))).

Structure
aucccau   c  c         UU            uuauau 
       ugu uu UAUGGCUUU  AUUCCUAUGUGA      u
       ||| || |||||||||  ||||||||||||       
       aca AA GUACCGAAG  UAGGGAUAUacu      g
------u   u  C         -U            uuaauc 


Annotation confidence Not enough data
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Genome context
AZIM01000063.1: 321331-321411 [-]

Database links

Mature oha-miR-135-5p

Accession MIMAT0036704
Description Ophiophagus hannah oha-miR-135-5p mature miRNA
Sequence 15 - UAUGGCUUUUUAUUCCUAUGUGA - 37
Evidence not_experimental

Mature oha-miR-135-1-3p

Accession MIMAT0036705
Description Ophiophagus hannah oha-miR-135-1-3p mature miRNA
Sequence 55 - UAUAGGGAUUGAAGCCAUGCAA - 76
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656