miRBase entry: oha-mir-135-2

Stem-loop oha-mir-135-2


Accession
MI0031346
Description
Ophiophagus hannah oha-mir-135-2 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

gaucaagauaaauucacucuaguguuuUAUGGCUUUUUAUUCCUAUGUGAuaguaauaaagucucAUGUAGGGAUGGAAGCCAUGAaauacauugugaaaaaucaucaa
......(((...(((((....((((((((((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))))))...)))))..))).....

Structure
gaucaa   aaa     ucua                U            u g a 
      gau   uucac    guguuuUAUGGCUUUU AUUCCUAUGUGA a u a
      |||   |||||    |||||||||||||||| |||||||||||| | | u
      cua   aagug    cauaaAGUACCGAAGG UAGGGAUGUAcu u a a
-aacua   -aa     -uua                -            c g a 


Annotation confidence Not enough data
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Genome context
AZIM01001783.1: 364665-364773 [+]

Database links

Mature oha-miR-135-5p

Accession MIMAT0036704
Description Ophiophagus hannah oha-miR-135-5p mature miRNA
Sequence 28 - UAUGGCUUUUUAUUCCUAUGUGA - 50
Evidence not_experimental

Mature oha-miR-135-2-3p

Accession MIMAT0036706
Description Ophiophagus hannah oha-miR-135-2-3p mature miRNA
Sequence 66 - AUGUAGGGAUGGAAGCCAUGA - 86
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656