miRBase entry: oha-mir-153-1

Stem-loop oha-mir-153-1


Accession
MI0031364
Description
Ophiophagus hannah oha-mir-153-1 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

ugccaguGUCAUUUUUGUGAUGUUGCAGCUaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUCAUuggaaa
..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))...

Structure
-ug      -             GU       -a  aa 
   ccaguG UCAUUUUUGUGAU  UGCAGCU  gu  u
   |||||| |||||||||||||  |||||||  ||  a
   gguUAC AGUGAAAACACUG  ACGUUga  cg  u
aaa      U             AU       cc  aa 


Annotation confidence Not enough data
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Genome context
AZIM01000183.1: 172560-172635 [+]

Database links

Mature oha-miR-153-1-5p

Accession MIMAT0036737
Description Ophiophagus hannah oha-miR-153-1-5p mature miRNA
Sequence 8 - GUCAUUUUUGUGAUGUUGCAGCU - 30
Evidence not_experimental

Mature oha-miR-153-3p

Accession MIMAT0036738
Description Ophiophagus hannah oha-miR-153-3p mature miRNA
Sequence 47 - UUGCAUAGUCACAAAAGUGAUCAU - 70
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656