miRBase entry: oha-mir-181a-2

Stem-loop oha-mir-181a-2


Accession
MI0031376
Description
Ophiophagus hannah oha-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

gguaaaaguucucggggAACAUUCAACGCUGUCGGUGAGUUuugucaaugaggucaaACCAUCGACUGUUGAGUGUACCcugcgcu
......(((...(((((.((((((((((..(((((((.((((.(.(......).)))))))))))))))))))))).))))).)))

Structure
gguaaa   ucu     A          CU       A    u u aa 
      agu   cgggg ACAUUCAACG  GUCGGUG GUUu g c  u
      |||   ||||| ||||||||||  ||||||| |||| | |   
      ucg   gucCC UGUGAGUUGU  CAGCUAC CAaa c g  g
------   --c     A          --       -    - u ga 


Annotation confidence Not enough data
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Genome context
AZIM01000021.1: 758346-758431 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-miR-181a-5p

Accession MIMAT0036757
Description Ophiophagus hannah oha-miR-181a-5p mature miRNA
Sequence 18 - AACAUUCAACGCUGUCGGUGAGUU - 41
Evidence not_experimental

Mature oha-miR-181a-2-3p

Accession MIMAT0036759
Description Ophiophagus hannah oha-miR-181a-2-3p mature miRNA
Sequence 58 - ACCAUCGACUGUUGAGUGUACC - 79
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656