miRBase entry: oha-mir-181c

Stem-loop oha-mir-181c


Accession
MI0031377
Description
Ophiophagus hannah oha-mir-181c precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

aaaacuaaaaagucacaaucAACAUUCAUUCUGUCGGUGGGUUguuaugcugguggagaagCUCACUGAUCAGUGAAUGCAAcuguggcugaa
..........(((((((.....((((((((..(((((((((((....(.(....).)..))))))))))).))))))))....)))))))...

Structure
aaaacuaaaa       aucAA        CU           guua g u 
          agucaca     CAUUCAUU  GUCGGUGGGUU    u c g
          |||||||     ||||||||  |||||||||||    | |  
          ucggugu     GUAAGUGA  UAGUCACUCga    a g g
-------aag       -cAAC        -C           --ag g u 


Annotation confidence Not enough data
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Genome context
AZIM01000021.1: 758696-758788 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-mir-181c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-miR-181c-5p

Accession MIMAT0036760
Description Ophiophagus hannah oha-miR-181c-5p mature miRNA
Sequence 21 - AACAUUCAUUCUGUCGGUGGGUU - 43
Evidence not_experimental

Mature oha-miR-181c-3p

Accession MIMAT0036761
Description Ophiophagus hannah oha-miR-181c-3p mature miRNA
Sequence 62 - CUCACUGAUCAGUGAAUGCAA - 82
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656