miRBase entry: oha-mir-193

Stem-loop oha-mir-193


Accession
MI0031387
Description
Ophiophagus hannah oha-mir-193 precursor miRNA
Gene family
MIPF0000082; mir-193


Sequence

uggggcUGGGUCUUUGCGGGCGAGAUGAgaaguuucugccuucAACUGGCCUACAAAGUCCCAGUucucggcuc
.(((((((((.(((((.((((.((.((((..((....)).)))).)).)))).))))).)))))))))......

Structure
-----u         U     C    G  A    aa  u 
      ggggcUGGG CUUUG GGGC AG UGAg  gu u
      ||||||||| ||||| |||| || ||||  ||  
      ucuUGACCC GAAAC UCCG UC Acuu  cg c
cucggc         U     A    G  A    -c  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AZIM01000911.1: 122155-122228 [-]

Database links

Mature oha-miR-193-5p

Accession MIMAT0036779
Description Ophiophagus hannah oha-miR-193-5p mature miRNA
Sequence 7 - UGGGUCUUUGCGGGCGAGAUGA - 28
Evidence not_experimental

Mature oha-miR-193-3p

Accession MIMAT0036780
Description Ophiophagus hannah oha-miR-193-3p mature miRNA
Sequence 44 - AACUGGCCUACAAAGUCCCAGU - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656