miRBase entry: oha-mir-204-1

Stem-loop oha-mir-204-1


Accession
MI0031404
Description
Ophiophagus hannah oha-mir-204-1 precursor miRNA
Gene family
MIPF0000042; mir-204


Sequence

ccuguggacUUCCCUUUGUCAUCCUAUGCCUgaggauauaugaaggggGCUGGGAAGGCAAAGGGACGUucaauugu
....(((((.((((((((((.(((((.((((...............))))))))).)))))))))).))))).....

Structure
-ccug     U          A     U    gaggau 
     uggac UCCCUUUGUC UCCUA GCCU      a
     ||||| |||||||||| ||||| ||||      u
     acuUG AGGGAAACGG AGGGU CGgg      a
uguua     C          A     -    ggaagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AZIM01000745.1: 257781-257857 [-]

Database links

Mature oha-miR-204-5p

Accession MIMAT0036812
Description Ophiophagus hannah oha-miR-204-5p mature miRNA
Sequence 10 - UUCCCUUUGUCAUCCUAUGCCU - 31
Evidence not_experimental

Mature oha-miR-204-1-3p

Accession MIMAT0036813
Description Ophiophagus hannah oha-miR-204-1-3p mature miRNA
Sequence 49 - GCUGGGAAGGCAAAGGGACGU - 69
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656