miRBase entry: oha-mir-21

Stem-loop oha-mir-21


Accession
MI0031411
Description
Ophiophagus hannah oha-mir-21 precursor miRNA
Gene family
MIPF0000060; mir-21


Sequence

cuuucugucggaUAGCUUAUCAGACUGAUGUUGAcuguuggaugucauggcAACAACAGUCGGUAGGCUGUCUgacauuuu
.....((((((((((((((((.(((((.(((((.((((........))))))))).)))))))))))))))))))))....

Structure
cuuuc                A     A     A    ugg 
     ugucggaUAGCUUAUC GACUG UGUUG cugu   a
     |||||||||||||||| ||||| ||||| ||||    
     acagUCUGUCGGAUGG CUGAC ACAAc ggua   u
-uuuu                -     A     -    cug 


Annotation confidence Not enough data
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Genome context
AZIM01005944.1: 49865-49945 [+]

Database links

Mature oha-miR-21-5p

Accession MIMAT0036824
Description Ophiophagus hannah oha-miR-21-5p mature miRNA
Sequence 13 - UAGCUUAUCAGACUGAUGUUGA - 34
Evidence not_experimental

Mature oha-miR-21-3p

Accession MIMAT0036825
Description Ophiophagus hannah oha-miR-21-3p mature miRNA
Sequence 52 - AACAACAGUCGGUAGGCUGUCU - 73
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656