miRBase entry: oha-mir-210

Stem-loop oha-mir-210


Accession
MI0031412
Description
Ophiophagus hannah oha-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

cagaagcaggugAGCCACUGACUAACGCACAUugugcugcuauguccccaCUGUGCGUGUGACAGCGGCUAAccugcu
....(((((((.((((.(((.(..(((((((.((.((......))...)).)))))))..).))).)))).)))))))

Structure
caga       g    A   A UA       U  --u  ug 
    agcaggu AGCC CUG C  ACGCACA ug   gc  c
    ||||||| |||| ||| |  ||||||| ||   ||   
    ucguccA UCGG GAC G  UGCGUGU ac   ug  u
----       A    C   A UG       C  ccc  ua 


Annotation confidence Not enough data
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Genome context
AZIM01000089.1: 101059-101136 [+]

Database links

Mature oha-miR-210-5p

Accession MIMAT0036826
Description Ophiophagus hannah oha-miR-210-5p mature miRNA
Sequence 13 - AGCCACUGACUAACGCACAU - 32
Evidence not_experimental

Mature oha-miR-210-3p

Accession MIMAT0036827
Description Ophiophagus hannah oha-miR-210-3p mature miRNA
Sequence 51 - CUGUGCGUGUGACAGCGGCUAA - 72
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656