miRBase entry: oha-mir-3120

Stem-loop oha-mir-3120

Accession

MI0031415

Description

Ophiophagus hannah oha-mir-3120 precursor miRNA

Gene family

MIPF0000062; mir-214

Sequence

ggauugucaugugacugCCUGUCUGUGCCUGCUGUACAggugagaggauguucugcacagcaaguguagacaggcagacacaugacaacu
...((((((((((.((((((((((((((.((((((.((((...........)))).)))))).)))))))))))))).))))))))))..

Structure

gga          a              C      A    ugag 
   uugucaugug cugCCUGUCUGUGC UGCUGU CAgg    a
   |||||||||| |||||||||||||| |||||| ||||    g
   aacaguacac gacggacagaugug acgaca gucu    g
-uc          a              a      c    ugua

Annotation confidence Not enough data

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Genome context

AZIM01005115.1: 129827-129916 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-3120

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-3120

Accession	MIMAT0036830
Description	Ophiophagus hannah oha-miR-3120 mature miRNA
Sequence	18 - CCUGUCUGUGCCUGCUGUACA - 38
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656