miRBase entry: oha-mir-217

Stem-loop oha-mir-217

Accession

MI0031418

Description

Ophiophagus hannah oha-mir-217 precursor miRNA

Gene family

MIPF0000077; mir-217

Sequence

ugaauuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGAUaauaaucaaacaccaucaguucuuaaugcauugccuucagcaucuaaacaagcuuca
.........(((((.(.((.((.(((((.((((((((((.((..............)))))))))))).))))).)).)).).))))).............

Structure

----ugaauuuuu     c c  a  C     C          U  AUaaua 
             gaugu g ag UA UGCAU AGGAACUGAU GG      a
             ||||| | || || ||||| |||||||||| ||       
             cuacg c uc gu acgua uucuugacua cc      u
acuucgaacaaau     a u  c  u     a          -  acaaac

Annotation confidence Not enough data

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Genome context

AZIM01000377.1: 292504-292604 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-217

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-217-5p

Accession	MIMAT0036835
Description	Ophiophagus hannah oha-miR-217-5p mature miRNA
Sequence	21 - UACUGCAUCAGGAACUGAUUGGAU - 44
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656