Stem-loop oha-mir-2188

Accession

MI0031421

Description

Ophiophagus hannah oha-mir-2188 precursor miRNA

Gene family

MIPF0000812; mir-2188

Sequence

gcaugucacccuuguggucAAGGUCCAACCUCAUGCGUCCUguaugcaaugaaaguggGAUGCAUGUGGUCAGACCUAGaccacaaggccgguggcc
....(((((((((((((((.(((((..(((.((((((((((...............)))))))))).)))..))))).)))))))))...)))))).

Structure

gcau      ---         A     CA   U          guaugc 
    gucacc   cuugugguc AGGUC  ACC CAUGCGUCCU      a
    ||||||   ||||||||| |||||  ||| ||||||||||      a
    cggugg   gaacaccaG UCCAG  UGG GUACGUAGgg      u
---c      ccg         A     AC   U          ugaaag 

Annotation confidence Not enough data

Genome context

AZIM01004815.1: 42038-42134 [+]

Mature oha-miR-2188-5p

• Accession: MIMAT0036839
• Description: Ophiophagus hannah oha-miR-2188-5p mature miRNA
• Sequence: 20 - AAGGUCCAACCUCAUGCGUCCU - 41
• Evidence: not_experimental

Mature oha-miR-2188-3p

• Accession: MIMAT0036840
• Description: Ophiophagus hannah oha-miR-2188-3p mature miRNA
• Sequence: 59 - GAUGCAUGUGGUCAGACCUAG - 79
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656