miRBase entry: oha-mir-30c-1

Stem-loop oha-mir-30c-1


Accession
MI0031453
Description
Ophiophagus hannah oha-mir-30c-1 precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

ugauagagagUGUAAACAUCCUACACUCUCAGCUguguggaaaagaugaaagCUGGGAGAAGGCUGUUUACUCUcuuug
...(((((((.(((((((.(((...(((((((((................))))))))).))).))))))).)))))))

Structure
uga       U       U   ACA         gugugga 
   uagagag GUAAACA CCU   CUCUCAGCU       a
   ||||||| ||||||| |||   |||||||||        
   guuucUC CAUUUGU GGA   GAGGGUCga       a
---       U       C   --A         aaguaga 


Annotation confidence Not enough data
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Genome context
AZIM01003324.1: 96890-96968 [-]

Database links

Mature oha-miR-30c-5p

Accession MIMAT0036892
Description Ophiophagus hannah oha-miR-30c-5p mature miRNA
Sequence 11 - UGUAAACAUCCUACACUCUCAGCU - 34
Evidence not_experimental

Mature oha-miR-30c-1-3p

Accession MIMAT0036894
Description Ophiophagus hannah oha-miR-30c-1-3p mature miRNA
Sequence 53 - CUGGGAGAAGGCUGUUUACUCU - 74
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656