Stem-loop oha-mir-425

Accession

MI0031468

Description

Ophiophagus hannah oha-mir-425 precursor miRNA

Gene family

MIPF0000242; mir-425

Sequence

ggaggagaaauugccaaggAAUGACACGAUCACUCCCGCUGagcgaguggacacagagccaCGGGGCUGUCGUGUCUGUCCugagcuuuuuccaaga
...(((((((..((..((((..(((((((.((.(((((.((.((...((....))..))))))))).)))))))))..))))..)))))))))....

Structure

-gga       uu  ca    AU       U  C     C  a  gag  g 
    ggagaaa  gc  aggA  GACACGA CA UCCCG UG gc   ug a
    |||||||  ||  ||||  ||||||| || ||||| || ||   ||  
    ccuuuuu  cg  uCCU  CUGUGCU GU GGGGC ac cg   ac c
agaa       --  ag    GU       -  C     -  -  -ag  a 

Annotation confidence Not enough data

Genome context

AZIM01001838.1: 344550-344646 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from oha-mir-425

Mature oha-miR-425-5p

• Accession: MIMAT0036921
• Description: Ophiophagus hannah oha-miR-425-5p mature miRNA
• Sequence: 20 - AAUGACACGAUCACUCCCGCUG - 41
• Evidence: not_experimental

Mature oha-miR-425-3p

• Accession: MIMAT0036922
• Description: Ophiophagus hannah oha-miR-425-3p mature miRNA
• Sequence: 62 - CGGGGCUGUCGUGUCUGUCC - 81
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656