miRBase entry: oha-mir-599

Stem-loop oha-mir-599


Accession
MI0031481
Description
Ophiophagus hannah oha-mir-599 precursor miRNA
Gene family
MIPF0000502; mir-599


Sequence

cauucacagugcguuugauaaguugacaugggacaggaauucuuuuucacuGUUGUGUCAAUUUAUCAAACcauauguggauaucaa
.((((((((((.(((((((((((((((((..((((((((......))).))))))))))))))))))))))))).))))))).....

Structure
----c       -   c                 gg     -   uu 
     auucaca gug guuugauaaguugacau  gacag gaa  c
     ||||||| ||| |||||||||||||||||  ||||| |||   
     uaggugu uac CAAACUAUUUAACUGUG  UUGuc cuu  u
aacua       a   -                 --     a   uu 


Annotation confidence Not enough data
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Genome context
AZIM01000686.1: 88304-88390 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-miR-599

Accession MIMAT0036944
Description Ophiophagus hannah oha-miR-599 mature miRNA
Sequence 52 - GUUGUGUCAAUUUAUCAAAC - 71
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656