miRBase entry: oha-mir-9-1

Stem-loop oha-mir-9-1


Accession
MI0031487
Description
Ophiophagus hannah oha-mir-9-1 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

ucggaagucauuucuaCUUUCGGUUAUCUAGCUUUAUgauggcuugauaacacUCAUACAGCUAGAUAACCAAAGAcagaaacggcccuccugcu
..(((.(((.(((((.((((.((((((((((((.(((((((.........)).))))).))))))))))))))))..))))).)))..)))....

Structure
--uc   -a   a     -a    C            U     -  gcu 
    gga  guc uuucu  CUUU GGUUAUCUAGCU UAUga ug   u
    |||  ||| |||||  |||| |||||||||||| ||||| ||   g
    ccu  cgg aaaga  GAAA CCAAUAGAUCGA AUACU ac   a
ucgu   cc   c     cA    -            C     c  aau 


Annotation confidence Not enough data
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Genome context
AZIM01001989.1: 73489-73583 [+]

Database links

Mature oha-miR-9-1-5p

Accession MIMAT0036953
Description Ophiophagus hannah oha-miR-9-1-5p mature miRNA
Sequence 17 - CUUUCGGUUAUCUAGCUUUAU - 37
Evidence not_experimental

Mature oha-miR-9-3p

Accession MIMAT0036954
Description Ophiophagus hannah oha-miR-9-3p mature miRNA
Sequence 54 - UCAUACAGCUAGAUAACCAAAGA - 76
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656