Stem-loop oha-mir-99a

Accession

MI0031495

Description

Ophiophagus hannah oha-mir-99a precursor miRNA

Sequence

gagugccaauuggcauaAACCCGUAGAUCCGAUCUUGUGgugaaauacugugcaCAAGCUCGUUUCUAUGGGUCAGugucagucugguga
....((((((((((((..(((((((((..(((.((((((.............)))))).)))..)))))))))..)))))))).))))..

Structure

gagu    -        aA         UC   U      gugaa 
    gcca auuggcau  ACCCGUAGA  CGA CUUGUG     a
    |||| ||||||||  |||||||||  ||| ||||||     u
    uggu ugacuguG  UGGGUAUCU  GCU GAACac     a
--ag    c        AC         UU   C      guguc 

Annotation confidence Not enough data

Genome context

AZIM01000064.1: 967763-967852 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-99a

Mature oha-miR-99a-5p

• Accession: MIMAT0036964
• Description: Ophiophagus hannah oha-miR-99a-5p mature miRNA
• Sequence: 18 - AACCCGUAGAUCCGAUCUUGUG - 39
• Evidence: not_experimental

Mature oha-miR-99a-3p

• Accession: MIMAT0036965
• Description: Ophiophagus hannah oha-miR-99a-3p mature miRNA
• Sequence: 55 - CAAGCUCGUUUCUAUGGGUCAG - 76
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656