Stem-loop bta-mir-4449

Accession

MI0031502

Description

Bos taurus bta-mir-4449 precursor miRNA

Gene family

MIPF0002103; mir-4449

Sequence

145 reads, 18 reads per million, 42 experiments

agcagcccucggcggccugggagggacgggcggcggugccCGUCCCGGGGCCGCUCGAGGCAcacugcg
.((((.((((((((((((....((((((((((....)))))))))).))))))).)))))....)))).

Structure

a    ---c     -       ggga          g 
 gcag    ccucg gcggccu    gggacgggcg c
 ||||    ||||| |||||||    ||||||||||  
 cguc    GGAGC CGCCGGG    CCCUGCccgu g
g    acAC     U       ---G          g 

Annotation confidence Not enough data

Genome context

chr6: 70343518-70343586 [+]

Mature bta-miR-4449

• Accession: MIMAT0036973
• Description: Bos taurus bta-miR-4449 mature miRNA
• Sequence: 41 - CGUCCCGGGGCCGCUCGAGGCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24021155
   Profiling microRNA expression in bovine alveolar macrophages using RNA-seq
   "Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
   "Vet Immunol Immunopathol (2013) 155:238-244