miRBase entry: bta-mir-3533

Stem-loop bta-mir-3533


Accession
MI0031504
Description
Bos taurus bta-mir-3533 precursor miRNA
Gene family
MIPF0002063; mir-3533


Sequence

70 reads, 29 reads per million, 27 experiments
gguauggaguccuguggcauccaugagaccaccuucaacuccaucAUGAAGUGUGACGUGGACAUccgaaaggaccuguaugcc
((((((.((((((.(((..((((((....((((((((.........))))).))).))))))...)))..)))).)).))))))

Structure
      g  -    -g   -ca      agac   -     acu 
gguaug ag uccu  ugg   uccaug    cac cuuca   c
|||||| || ||||  |||   ||||||    ||| |||||   c
ccguau uc agga  gcc   AGGUGC    GUG GAAGU   a
      g  c    aa   UAC      ---A   U     Acu 


Annotation confidence Not enough data
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Genome context
chr19: 52085649-52085732 [+]

Database links

Mature bta-miR-3533

Accession MIMAT0036975
Description Bos taurus bta-miR-3533 mature miRNA
Sequence 46 - AUGAAGUGUGACGUGGACAU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24021155
    Profiling microRNA expression in bovine alveolar macrophages using RNA-seq
    "Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
    "Vet Immunol Immunopathol (2013) 155:238-244