Stem-loop hsa-mir-3648-2

Accession

MI0031512

Symbol

HGNC: MIR3648-2

Description

Homo sapiens hsa-mir-3648-2 precursor miRNA

Gene family

MIPF0001984; mir-3648

Literature search

14 open access papers mention hsa-mir-3648-2
(91 sentences)

Sequence

1161 reads, 1047 reads per million, 118 experiments

cgcgacugcggcggcggugguggggggAGCCGCGGGGAUCGCCGAGGGccggucggccgccccgggugccgcgcggugccgccggcggcggugaggccccgcgcgugugucccggcugcggucggccgcgcucgagggguccccguggcguccccuuccccgccggccgccuuucucgcg
(((((..((((((((((.((.((((((.((((((((((((.(((((.((.((((((((((.(((((((((((((((.(((((((....))))..))).))))))).))).)))))..)))))))))))).)))).).)))))))))))).)))))).))))))).))))).....)))))

Structure

     ---cu     -     u  u      A            G -    G  c          -c     -   -       u   --    g 
cgcga     gcggc ggcgg gg gggggg GCCGCGGGGAUC C CGAG Gc ggucggccgc  ccggg ugc cgcgcgg gcc  gccg c
|||||     ||||| ||||| || |||||| |||||||||||| | |||| || ||||||||||  ||||| ||| ||||||| |||  ||||  
gcgcu     cgccg ccgcc cc uccccu cggugccccugg g gcuc cg ccggcuggcg  ggccc gug gcgcgcc cgg  uggc g
     cuuuc     g     -  u      g            g a    g  -          uc     u   u       c   ag    g 

Annotation confidence Low

Genome context

chr21: 8986999-8987178 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3648-2

Mature hsa-miR-3648

• Accession: MIMAT0018068
• Description: Homo sapiens hsa-miR-3648 mature miRNA
• Sequence: 28 - AGCCGCGGGGAUCGCCGAGGG - 48
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20483914
   Discovery of microRNAs and other small RNAs in solid tumors
   "Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E"
   "Nucleic Acids Res (2010) 38:6234-6246