miRBase entry: tae-MIR9773

Stem-loop tae-MIR9773


Accession
MI0031525
Description
Triticum aestivum tae-MIR9773 precursor miRNA


Sequence

27132 reads, 201 reads per million, 116 experiments
uuguuguucagaaauaggaaagcagaaugaaauccagucuuagucaaauauuucauaucucuucuuauccauuuaaacauauggauuuagaguagagcauauggaucaaucuauuuauaauuauaagaaucgaaugugUUUGUUUUUAUGUUAUUUUGUGAAgaa
...((.((((((((((((((((((((......((...(((((.........(((((((((((.(((((((((........))))))...))).)))).)))))))..................)))))...)).....)))))))))...))))))).)))).))

Structure
uug  g    -       ---         augaaa  cag     ---------gucaaauau       -    u   ---      uua 
   uu uuca gaaauag   gaaagcaga      uc   ucuua                  uucauau cucu cuu   auccau   a
   || |||| |||||||   |||||||||      ||   |||||                  ||||||| |||| |||   ||||||    
   aa AAGU UUUUAUU   UUUUUGUUU      ag   agaau                  agguaua gaga gag   uaggua   a
---  g    G       GUA         -gugua  cua     auuaauauuuaucuaacu       c    u   auu      uac 


Annotation confidence Low
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Comments
This sequence was incorrectly named MIR2004 in [1].

Genome context
Unknown

Database links

Mature tae-miR9773

Accession MIMAT0036983
Description Triticum aestivum tae-miR9773 mature miRNA
Sequence 139 - UUUGUUUUUAUGUUAUUUUGUGAA - 162
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19499258
    Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
    "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
    "Funct Integr Genomics (2009) 9:499-511