miRBase entry: ssc-mir-9792

Stem-loop ssc-mir-9792


Accession
MI0031556
Description
Sus scrofa ssc-mir-9792 precursor miRNA


Sequence

aagcugugcuCAAGUGGAAAGAUCGUAGGGCuaggacucuuuauucuuuauguaaggagucuccuuggucuaucucacucuuugucucgguuuc
((((((.((...((((((.((((((.(((....(((((((((((.......)))))))))))))))))))).)).))))....))..)))))).

Structure
-      -u  -uCA    -  A      U   GCua           uc 
 aagcug  gc    AGUG GA AGAUCG AGG    ggacucuuuau  u
 ||||||  ||    |||| || |||||| |||    |||||||||||  u
 uuuggc  ug    ucac cu ucuggu ucc    ucugaggaaug  u
c      uc  uuuc    u  a      -   ----           ua 


Annotation confidence Not enough data
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Genome context
chr8: 119024451-119024544 [+]

Database links

Mature ssc-miR-9792-5p

Accession MIMAT0037010
Description Sus scrofa ssc-miR-9792-5p mature miRNA
Sequence 11 - CAAGUGGAAAGAUCGUAGGGC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100