miRBase entry: ssc-mir-9799

Stem-loop ssc-mir-9799


Accession
MI0031563
Description
Sus scrofa ssc-mir-9799 precursor miRNA


Sequence

2 reads, 3 reads per million, 2 experiments
uagagucaaaguucugcggggugggggaugggucaagacauuuuguggguugguucuCAUUGCUUUGAUCGUCUGGCugugauacuu
....((((.((((..((((...(((.((((((((((..(((...)))..))))..)))))).)))...))))..)))).))))....

Structure
uaga    a    cu    ggu   g      --    ga   u 
    guca aguu  gcgg   ggg gauggg  ucaa  cau  
    |||| ||||  ||||   ||| ||||||  ||||  ||| u
    uagu uCGG  UGCU   UUC UUACuc  gguu  gug  
uuca    g    UC    AGU   G      uu    gg   u 


Annotation confidence Not enough data
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Genome context
chr16: 39346543-39346629 [+]

Database links

Mature ssc-miR-9799-3p

Accession MIMAT0037017
Description Sus scrofa ssc-miR-9799-3p mature miRNA
Sequence 58 - CAUUGCUUUGAUCGUCUGGC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100