miRBase entry: ssc-mir-9817

Stem-loop ssc-mir-9817


Accession
MI0031584
Description
Sus scrofa ssc-mir-9817 precursor miRNA


Sequence

ccguuacggcCUUUUCCAAAAUGUCGUCGGAAcagaaacacacggcgugugcuggcaggggugucgagggu
((.((...((((((.(((..(((.(((((.............))))))))..))).))))))...)).)).

Structure
-  g  acg      U   AA   U     GAAca 
 cc uu   gcCUUU CCA  AUG CGUCG     g
 || ||   |||||| |||  ||| |||||     a
 gg ag   ugggga ggu  ugu gcggc     a
u  g  cug      c   cg   -     acaca 


Annotation confidence Not enough data
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Genome context
chr3: 1180174-1180244 [+]

Database links

Mature ssc-miR-9817-5p

Accession MIMAT0037035
Description Sus scrofa ssc-miR-9817-5p mature miRNA
Sequence 11 - CUUUUCCAAAAUGUCGUCGGAA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100