miRBase entry: ssc-mir-9854

Stem-loop ssc-mir-9854


Accession
MI0031631
Description
Sus scrofa ssc-mir-9854 precursor miRNA


Sequence

cauucccuccUGUGUGUGAUCGUUAAUGUGCuguaaaaauacauuacccagauuccgcgaucucuacagggugugauua
...(((.(((((((.(.((((((.(((.((..((((.......)))).)).)))..)))))).)))))))).).))...

Structure
cau  - c       U U      -U   G  Cu    aa 
   uc c uccUGUG G GAUCGU  AAU UG  guaa  a
   || | ||||||| | ||||||  ||| ||  ||||  u
   ag g gggacau c cuagcg  uua ac  cauu  a
auu  u u       - u      cc   g  -c    ac 


Annotation confidence Not enough data
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Genome context
chr14: 12004173-12004251 [-]

Database links

Mature ssc-miR-9854-5p

Accession MIMAT0037073
Description Sus scrofa ssc-miR-9854-5p mature miRNA
Sequence 11 - UGUGUGUGAUCGUUAAUGUGC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100