Stem-loop ssc-mir-9858

Accession

MI0031636

Description

Sus scrofa ssc-mir-9858 precursor miRNA

Sequence

ggcuccggggUUCCUGAGUCGGACUGGGCUgcggagcgucuacacgcaccccaucccccuccggagcgcugaggcugg
((((.(((.(((((.(((..(((.((((.((((...........)))).)))))))..))).))))).))).))))..

Structure

--    c   g     U   UC   C    C    gagc 
  ggcu cgg gUUCC GAG  GGA UGGG Ugcg    g
  |||| ||| ||||| |||  ||| |||| ||||    u
  ucgg guc cgagg cuc  ccu accc acgc    c
gg    a   g     c   cc   -    c    acau 

Annotation confidence Not enough data

Genome context

chr4: 56174501-56174578 [+]

Mature ssc-miR-9858-5p

• Accession: MIMAT0037077
• Description: Sus scrofa ssc-miR-9858-5p mature miRNA
• Sequence: 11 - UUCCUGAGUCGGACUGGGCU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100