miRBase entry: ata-MIR2275b

Stem-loop ata-MIR2275b


Accession
MI0031665
Description
Aegilops tauschii ata-MIR2275b precursor miRNA
Gene family
MIPF0000797; MIR2275


Sequence

acugaaagugAGAGUUGGAGGAAAACAAACAgaucauggcuagcuaaucguggucaccgaucagCUUGUUUUCCUCCAAUAUCUCAccuucgguug
((((((.(((((((((((((((((((((.(.((((.((((((........))))))..)))).).))))))))))))))).)))))).))))))..

Structure
--      a      -               A A    -a      gcu 
  acugaa gugAGA GUUGGAGGAAAACAA C gauc  uggcua   a
  |||||| |||||| ||||||||||||||| | ||||  ||||||    
  uggcuu cACUCU UAACCUCCUUUUGUU g cuag  acuggu   a
gu      c      A               C a    cc      gcu 


Annotation confidence Not enough data
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Genome context
chr3: 65654016-65654111 [-]

Database links

Mature ata-miR2275b-5p

Accession MIMAT0037124
Description Aegilops tauschii ata-miR2275b-5p mature miRNA
Sequence 11 - AGAGUUGGAGGAAAACAAACA - 31
Evidence experimental
Illumina [1]

Mature ata-miR2275b-3p

Accession MIMAT0037125
Description Aegilops tauschii ata-miR2275b-3p mature miRNA
Sequence 65 - CUUGUUUUCCUCCAAUAUCUCA - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95