Stem-loop ata-MIR9772b

Accession

MI0031680

Description

Aegilops tauschii ata-MIR9772b precursor miRNA

Gene family

MIPF0001934; MIR9772

Sequence

uagcggccguUGAGAUGAGAUUACCCCAUACcauauagcggcagcucgacuccgcacacgcguAGGGGGCAAUCUCACCUCAACagcuucuc
.((.(((.((((((.(((((((.((((.(((......((((.((.....))))))......))).)))).))))))).)))))).))).)).

Structure

u  c   c      A       A    A   cauaua    c  c 
 ag ggc guUGAG UGAGAUU CCCC UAC      gcgg ag u
 || ||| |||||| ||||||| |||| |||      |||| || c
 uc ucg CAACUC ACUCUAA GGGG Aug      cgcc uc g
c  u   a      C       C    G   cgcaca    -  a 

Annotation confidence Not enough data

Genome context

chr5: 421662338-421662429 [-]

Mature ata-miR9772b-5p

• Accession: MIMAT0037154
• Description: Aegilops tauschii ata-miR9772b-5p mature miRNA
• Sequence: 11 - UGAGAUGAGAUUACCCCAUAC - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR9772b-3p

• Accession: MIMAT0037155
• Description: Aegilops tauschii ata-miR9772b-3p mature miRNA
• Sequence: 64 - AGGGGGCAAUCUCACCUCAAC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95