Stem-loop ata-MIR528

Accession

MI0031699

Description

Aegilops tauschii ata-MIR528 precursor miRNA

Gene family

MIPF0000868; MIR528

Sequence

gcagcagcggUGGAAGGGGCAUGCAGAGGAGcggccauggcccaugggagcuuugcuugccuugccucucgcucucuCCUGUGCCUGCCUCUUCCAUUccugcggcua
((.((((.(((((((((((((.(((.(((((.(((...(((....(.((((...)))).)...)))....)).).))))).))).))))))))))))).)))).))..

Structure

--  a    c             U   G     c -  -cau   ccau g    u 
  gc gcag ggUGGAAGGGGCA GCA AGGAG g gc    ggc    g gagc  
  || |||| ||||||||||||| ||| ||||| | ||    |||    | |||| u
  cg cguc UUACCUUCUCCGU CGU UCCuc c cg    ccg    c uucg  
au  g    c             C   G     u u  cucu   -uuc g    u 

Annotation confidence Not enough data

Genome context

chr4: 384368280-384368387 [+]

Mature ata-miR528-5p

• Accession: MIMAT0037192
• Description: Aegilops tauschii ata-miR528-5p mature miRNA
• Sequence: 11 - UGGAAGGGGCAUGCAGAGGAG - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR528-3p

• Accession: MIMAT0037193
• Description: Aegilops tauschii ata-miR528-3p mature miRNA
• Sequence: 78 - CCUGUGCCUGCCUCUUCCAUU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95