miRBase entry: ata-MIR9674c

Stem-loop ata-MIR9674c


Accession
MI0031700
Description
Aegilops tauschii ata-MIR9674c precursor miRNA


Sequence

auccucugguUGAAUUUUUCCAUAGCAUCAGcaccggccauucaacucuggugguaguaguugcugccuuuuggcgcuGGUGCUAUGGAUAAAUUCAACcggaugguu
..(((((((((((((((.((((((((((((((.(((((((........))))((((((....))))))...))).)))))))))))))).))))))))))))).))..

Structure
au  -             U              a   gccauucaacucuggu      a 
  cc ucugguUGAAUUU UCCAUAGCAUCAGc ccg                gguagu g
  || ||||||||||||| |||||||||||||| |||                ||||||  
  gg aggcCAACUUAAA AGGUAUCGUGGucg ggu                ccgucg u
uu  u             U              c   -------------uuu      u 


Annotation confidence Not enough data
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Genome context
chr4: 408976178-408976285 [-]

Database links

Mature ata-miR9674c-5p

Accession MIMAT0037194
Description Aegilops tauschii ata-miR9674c-5p mature miRNA
Sequence 11 - UGAAUUUUUCCAUAGCAUCAG - 31
Evidence experimental
Illumina [1]

Mature ata-miR9674c-3p

Accession MIMAT0037195
Description Aegilops tauschii ata-miR9674c-3p mature miRNA
Sequence 79 - GGUGCUAUGGAUAAAUUCAAC - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95