Stem-loop ata-MIR9677

Accession

MI0031715

Description

Aegilops tauschii ata-MIR9677 precursor miRNA

Gene family

MIPF0001925; MIR9677

Sequence

ggccucgcuucucUUCCACUCUACCAACAGCCACGucucccccgcgaccauggcgUGGCCGUUGGUAGAGUAGGAGAcgagcauggc
.(((..((((.(((((.(((((((((((.((((((((..............)))))))).))))))))))).))))).))))..)))

Structure

g   uc    c     C           A        uccccc 
 gcc  gcuu ucUUC ACUCUACCAAC GCCACGuc      g
 |||  |||| ||||| ||||||||||| ||||||||       
 cgg  cgag AGAGG UGAGAUGGUUG CGGUgcgg      c
-   ua    c     A           C        uaccag 

Annotation confidence Not enough data

Genome context

chr3: 109677717-109677803 [-]

Mature ata-miR9677-5p

• Accession: MIMAT0037224
• Description: Aegilops tauschii ata-miR9677-5p mature miRNA
• Sequence: 14 - UUCCACUCUACCAACAGCCACG - 35
• Evidence: experimental ; Illumina [1]

Mature ata-miR9677-3p

• Accession: MIMAT0037225
• Description: Aegilops tauschii ata-miR9677-3p mature miRNA
• Sequence: 56 - UGGCCGUUGGUAGAGUAGGAGA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95