miRBase entry: api-mir-3021-3

Stem-loop api-mir-3021-3


Accession
MI0031737
Description
Acyrthosiphon pisum api-mir-3021-3 precursor miRNA
Gene family
MIPF0001946; mir-3021


Sequence

UUGUCUUGUGUAGUCCAUGAUAGCAUCgaaaccauccuccauggaaaauggacagcgcgggucauuc
.((.(((((((.((((((.....(((.((........)).)))....)))))).))))))).))...

Structure
--U  U       A      GAUAG   C  aac 
   UG CUUGUGU GUCCAU     CAU ga   c
   || ||||||| ||||||     ||| ||    
   ac gggcgcg caggua     gua cu   a
cuu  u       a      -aaag   c  ccu 


Annotation confidence Not enough data
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Genome context
GL369494.1: 292-358 [-]

Database links

Mature api-miR-3021

Accession MIMAT0014757
Description Acyrthosiphon pisum api-miR-3021 mature miRNA
Sequence 1 - UUGUCUUGUGUAGUCCAUGAUAGCAUC - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281