miRBase entry: cja-let-7g

Stem-loop cja-let-7g


Accession
MI0031835
Description
Callithrix jacchus cja-let-7g precursor miRNA


Sequence

gcuccguuuccuuuugccugauuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugccaggaacagugcgccagcugccaaauggggc
(((((((((.((..((((((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))))).)))..)).....)))))))))

Structure
         ----c  uu   -   a    a   U        A            ugagg    -a  a    a 
gcuccguuu     cu  ugc cug uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
|||||||||     ||  ||| ||| |||| ||| |||||||| ||||||||||||     ||||  || ||||  
cgggguaaa     ga  gcg gac aagg ccg uuccguca cggacaugucaa     uaga  ac augg c
         ccguc  cc   u   -    a   -        c            -----    gg  -    c 


Annotation confidence Not enough data
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Genome context
chr15: 28012943-28013080 [-]

Database links

Mature cja-let-7g

Accession MIMAT0039326
Description Callithrix jacchus cja-let-7g mature miRNA
Sequence 30 - UGAGGUAGUAGUUUGUACAGUU - 51
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596