miRBase entry: cja-mir-519a

Stem-loop cja-mir-519a


Accession
MI0031837
Description
Callithrix jacchus cja-mir-519a precursor miRNA


Sequence

ucucaggccgugacccucuacaaggaagcacuuccuguugucagaaagaaaagAAAGUGCAUCCUUGUACAGGGUuacugucugaga
((((((((.((((((((.((((((((.((((((.((....((.....))..)).)))))).)))))))).)))))))).))))))))

Structure
        c        c        a      c  guug  a 
ucucaggc gugacccu uacaagga gcacuu cu    uc g
|||||||| |||||||| |||||||| |||||| ||    || a
agagucug cauUGGGA AUGUUCCU CGUGAA ga    ag a
        u        C        A      A  --aa  a 


Annotation confidence Not enough data
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Genome context
chr22: 44898890-44898976 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cja-mir-519a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-519a

Accession MIMAT0039328
Description Callithrix jacchus cja-miR-519a mature miRNA
Sequence 54 - AAAGUGCAUCCUUGUACAGGGU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857