miRBase entry: cja-mir-371a

Stem-loop cja-mir-371a


Accession
MI0031839
Description
Callithrix jacchus cja-mir-371a precursor miRNA


Sequence

gugccACUCAAACUGUGGGGGCACUUUcuguucuggugaaagugccgccauuuuuugaguguuac
(((.((((((((..((((.(((((((((.........))))))))).))))..)))))))).)))

Structure
   c        CU    G         ugu 
gug cACUCAAA  GUGG GGCACUUUc   u
||| ||||||||  |||| |||||||||   c
cau gugaguuu  uacc ccgugaaag   u
   u        uu    g         ugg 


Annotation confidence Not enough data
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Genome context
chr22: 45042637-45042701 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cja-mir-371a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-371a

Accession MIMAT0039330
Description Callithrix jacchus cja-miR-371a mature miRNA
Sequence 6 - ACUCAAACUGUGGGGGCACUUU - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857