miRBase entry: cja-mir-1323

Stem-loop cja-mir-1323

Accession

MI0031840

Description

Callithrix jacchus cja-mir-1323 precursor miRNA

Sequence

auucacgcugagguccUCAAAACUGAGGGGCAUUUUCUguggucuaaaaggaaaaugcaccccaguuuugugguucucaauugugaau
(((((((.(((((.((.((((((((.((((((((((((...........))))))))).))))))))))).)).)))))..)))))))

Structure

       -c     u  U        A   -         gugg 
auucacg  ugagg cc CAAAACUG GGG GCAUUUUCU    u
|||||||  ||||| || |||||||| ||| |||||||||    c
uaagugu  acucu gg guuuugac ccc cguaaaagg    u
       ua     u  u        -   a         aaaa

Annotation confidence Not enough data

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Genome context

chr22: 44878663-44878750 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-1323

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-1323

Accession	MIMAT0039331
Description	Callithrix jacchus cja-miR-1323 mature miRNA
Sequence	17 - UCAAAACUGAGGGGCAUUUUCU - 38
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857