miRBase entry: cja-mir-513b-1

Stem-loop cja-mir-513b-1


Accession
MI0031841
Description
Callithrix jacchus cja-mir-513b-1 precursor miRNA


Sequence

gugcagugcccUUCACAAGGAGCUGUCAUUCAuguggacuaaaaccugaaugccgccuucuugagaagaguaauguac
(((((.(((.((((.(((((((.((.((((((.((........)).)))))).)).))))))).)))).))).)))))

Structure
     g   c    A       C  U      u  gga 
gugca ugc cUUC CAAGGAG UG CAUUCA gu   c
||||| ||| |||| ||||||| || |||||| ||    
caugu aug gaag guucuuc gc guaagu ca   u
     a   a    a       c  c      c  aaa 


Annotation confidence Not enough data
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Genome context
chrX: 134409132-134409209 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-513b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-513b-5p

Accession MIMAT0039332
Description Callithrix jacchus cja-miR-513b-5p mature miRNA
Sequence 12 - UUCACAAGGAGCUGUCAUUCA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857