miRBase entry: cja-mir-513a-2

Stem-loop cja-mir-513a-2

Accession

MI0031844

Description

Callithrix jacchus cja-mir-513a-2 precursor miRNA

Sequence

ugcccUUCACAAGGAGGUGUCAUUCAUguggacuaaauccugaaugccgccuucuugagaagagua
(((.((((.((((((((((.((((((...(((.....))))))))).)))))))))).)))).)))

Structure

   c    A          U      Ugu   c 
ugc cUUC CAAGGAGGUG CAUUCA   gga u
||| |||| |||||||||| ||||||   ||| a
aug gaag guucuuccgc guaagu   ccu a
   a    a          c      ---   a

Annotation confidence Not enough data

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Genome context

chrX: 134318264-134318329 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-513a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-513a-5p

Accession	MIMAT0039333
Description	Callithrix jacchus cja-miR-513a-5p mature miRNA
Sequence	6 - UUCACAAGGAGGUGUCAUUCAU - 27
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857