Stem-loop cja-mir-99

Accession

MI0031863

Description

Callithrix jacchus cja-mir-99 precursor miRNA

Sequence

guugcccauuggcauaAACCCGUAGAUCCGAUCUUGUggugaaguggaccgcacaagcucgcuucuaugggucugugucagugugguaau
((((((((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).)))))))))).))))))

Structure

      -          A         UC   U      g  aag 
guugcc cauuggcaua ACCCGUAGA  CGA CUUGUg ug   u
|||||| |||||||||| |||||||||  ||| |||||| ||    
uaaugg gugacugugu uggguaucu  gcu gaacac gc   g
      u          c         uc   c      -  cag 

Annotation confidence Not enough data

Genome context

chr21: 21285939-21286028 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-99

Mature cja-miR-99

• Accession: MIMAT0039348
• Description: Callithrix jacchus cja-miR-99 mature miRNA
• Sequence: 17 - AACCCGUAGAUCCGAUCUUGU - 37
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596